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Ten Simple Rules for taking advantage of Git and GitHub

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dc.contributor.authorPerez-Riverol, Yasset
dc.contributor.authorGatto, Laurent
dc.contributor.authorWang, Rui
dc.contributor.authorSachsenberg, Timo
dc.contributor.authorUszkoreit, Julian
dc.contributor.authorda Veiga Leprevost, Felipe
dc.contributor.authorFufezan, Christian
dc.contributor.authorTernent, Tobias
dc.contributor.authorEglen, Stephen J.
dc.contributor.authorKatz, Daniel S.
dc.contributor.authorPollard, Tom J.
dc.contributor.authorKonovalov, Alexander
dc.contributor.authorFlight, Robert M.
dc.contributor.authorBlin, Kai
dc.contributor.authorVizcaíno, Juan Antonio
dc.date.accessioned2016-07-15T12:30:12Z
dc.date.available2016-07-15T12:30:12Z
dc.date.issued2016-07-14
dc.identifier.citationPerez-Riverol , Y , Gatto , L , Wang , R , Sachsenberg , T , Uszkoreit , J , da Veiga Leprevost , F , Fufezan , C , Ternent , T , Eglen , S J , Katz , D S , Pollard , T J , Konovalov , A , Flight , R M , Blin , K & Vizcaíno , J A 2016 , ' Ten Simple Rules for taking advantage of Git and GitHub ' , PLoS Computational Biology , vol. 12 , no. 7 , e1004947 . https://doi.org/10.1371/journal.pcbi.1004947 , https://doi.org/10.1101/048744en
dc.identifier.issn1553-734X
dc.identifier.otherPURE: 242457859
dc.identifier.otherPURE UUID: 5800e9b6-8469-4b9d-b8e7-85e7633ce0b2
dc.identifier.otherBibtex: urn:6a6883ebbadaa58a2d67898fb28e760f
dc.identifier.otherScopus: 84980017399
dc.identifier.otherWOS: 000383351400009
dc.identifier.urihttps://hdl.handle.net/10023/9146
dc.descriptionThis study was supported by Wellcome Trust [grant number WT101477MA] (http://www.wellcome.ac.uk/), BBSRC [grant numbers BB/K01997X/1, BB/I00095X/1, BB/L024225/1 and BB/L002817/1] (http://www.bbsrc.ac.uk/), BMBF grant de.NBI - German Network for Bioinformatics Infrastructure (FKZ031 A 534A) (https://www.denbi.de/), NIH grant numbers R01-GM-094231 and R01-EB-017205 (http://www.nih.gov/), EPSRC [reference EP/M022641/1] (https://www.epsrc.ac.uk), NSF grant number 1252893 (http://www.nsf.gov/), and Novo Nordisk Foundation (http://www.novonordiskfonden.dk/en).en
dc.description.abstractA 'Ten Simple Rules' guide to Git and GitHub. We describe and provide examples on how to use these software to track projects, as users, teams and organizations. We document collaborative development using branching and forking, interaction between collaborators using issues and continuous integration and automation using, for example, Travis CI and codevoc. We also describe dissemination and social aspects of GitHub such as GitHub pages, following and watching repositories, and give advice on how to make code citable.
dc.format.extent11
dc.language.isoeng
dc.relation.ispartofPLoS Computational Biologyen
dc.rightsCopyright: © 2016 Perez-Riverol et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.en
dc.subjectQA75 Electronic computers. Computer scienceen
dc.subjectT-DASen
dc.subject.lccQA75en
dc.titleTen Simple Rules for taking advantage of Git and GitHuben
dc.typeJournal articleen
dc.contributor.sponsorEPSRCen
dc.description.versionPublisher PDFen
dc.contributor.institutionUniversity of St Andrews. School of Computer Scienceen
dc.contributor.institutionUniversity of St Andrews. Centre for Interdisciplinary Research in Computational Algebraen
dc.identifier.doihttps://doi.org/10.1371/journal.pcbi.1004947
dc.description.statusPeer revieweden
dc.identifier.urlhttp://biorxiv.org/content/early/2016/05/06/048744en
dc.identifier.grantnumberEP/M022641/1en


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