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A new integrated approach to taxonomy : the fusion of molecular and morphological systematics with type material in benthic foraminifera

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Austin_2016_PLOSone_NewTaxonomy_CCBY_FinalPublishedVersion.pdf (3.908Mb)
Date
07/07/2016
Author
Roberts, Angela Dawn
Austin, William
Evans, Katharine
Bird, Clare
Schweizer, Magali
Darling, Kate
Keywords
QH301 Biology
DAS
BDC
R2C
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Abstract
A robust and consistent taxonomy underpins the use of fossil material in palaeoenvironmental research and long-term assessment of biodiversity. This study presents a new integrated taxonomic protocol for benthic foraminifera by unequivocally reconciling the traditional taxonomic name to a specific genetic type. To implement this protocol, a fragment of the small subunit ribosomal RNA (SSU rRNA) gene is used in combination with 16 quantitative morphometric variables to fully characterise the benthic foraminiferal species concept of Elphidium williamsoni Haynes, 1973. A combination of live contemporary topotypic specimens, original type specimens and specimens of genetic outliers were utilised in this study. Through a series of multivariate statistical tests we illustrate that genetically characterised topotype specimens are morphologically congruent with both the holotype and paratype specimens of E. williamsoni Haynes, 1973. We present the first clear link between morphologically characterised type material and the unique SSU rRNA genetic type of E. williamsoni. This example provides a standard framework for the benthic foraminifera which bridges the current discontinuity between molecular and morphological lines of evidence, allowing integration with the traditional Linnaean roots of nomenclature to offer a new prospect for taxonomic stability.
Citation
Roberts , A D , Austin , W , Evans , K , Bird , C , Schweizer , M & Darling , K 2016 , ' A new integrated approach to taxonomy : the fusion of molecular and morphological systematics with type material in benthic foraminifera ' , PLoS One , vol. 11 , no. 7 , e0158754 . https://doi.org/10.1371/journal.pone.0158754
Publication
PLoS One
Status
Peer reviewed
DOI
https://doi.org/10.1371/journal.pone.0158754
ISSN
1932-6203
Type
Journal article
Rights
© 2016 Roberts et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
Description
This work was supported by NERC grant NE4/G018502/1 and NE/G020310/1 (Website: http://www.nerc.ac.uk). The authors also thank the following for their support the Carnegie Trust for the Universities of Scotland (Website: http://www.carnegie-trust.org) and the Estuarine Coastal and Shelf Science Association (Website: http://www.ecsanews.org). M.S. was also supported by the Swiss National Science Foundation (SNSF), fellowships for advanced researchers PA00P2_126226 and PA00P2_142065 (Website: http://www.snf.ch/en/Pages/default.aspx).
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  • University of St Andrews Research
URL
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0158754#sec023
URI
http://hdl.handle.net/10023/9099

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