Show simple item record

Files in this item

Thumbnail

Item metadata

dc.contributor.authorPascall, David J.
dc.contributor.authorVink, Elen
dc.contributor.authorBlacow, Rachel
dc.contributor.authorBulteel, Naomi
dc.contributor.authorCampbell, Alasdair
dc.contributor.authorCampbell, Robyn
dc.contributor.authorClifford, Sarah
dc.contributor.authorDavis, Chris
dc.contributor.authorda Silva Filipe, Ana
dc.contributor.authorEl Sakka, Noha
dc.contributor.authorFjodorova, Ludmila
dc.contributor.authorForrest, Ruth
dc.contributor.authorGoldstein, Emily
dc.contributor.authorGunson, Rory
dc.contributor.authorHaughney, John
dc.contributor.authorHolden, Matthew T.G.
dc.contributor.authorHonour, Patrick
dc.contributor.authorHughes, Joseph
dc.contributor.authorJames, Edward
dc.contributor.authorLewis, Tim
dc.contributor.authorMacLean, Oscar
dc.contributor.authorMcHugh, Martin
dc.contributor.authorMollett, Guy
dc.contributor.authorNyberg, Tommy
dc.contributor.authorOnishi, Yusuke
dc.contributor.authorParcell, Ben
dc.contributor.authorRay, Surajit
dc.contributor.authorRobertson, David L.
dc.contributor.authorSeaman, Shaun R.
dc.contributor.authorShabaan, Sharif
dc.contributor.authorShepherd, James G.
dc.contributor.authorSmollett, Katherine
dc.contributor.authorTempleton, Kate
dc.contributor.authorWastnedge, Elizabeth
dc.contributor.authorWilkie, Craig
dc.contributor.authorWilliams, Thomas
dc.contributor.authorThe COVID-19 Genomics UK (COG-UK) Consortium
dc.contributor.authorThomson, Emma C.
dc.date.accessioned2024-05-31T23:39:26Z
dc.date.available2024-05-31T23:39:26Z
dc.date.issued2023-08-01
dc.identifier287060967
dc.identifierd348840a-7a53-4c0c-93e8-44c901b37bbf
dc.identifier85163078778
dc.identifier.citationPascall , D J , Vink , E , Blacow , R , Bulteel , N , Campbell , A , Campbell , R , Clifford , S , Davis , C , da Silva Filipe , A , El Sakka , N , Fjodorova , L , Forrest , R , Goldstein , E , Gunson , R , Haughney , J , Holden , M T G , Honour , P , Hughes , J , James , E , Lewis , T , MacLean , O , McHugh , M , Mollett , G , Nyberg , T , Onishi , Y , Parcell , B , Ray , S , Robertson , D L , Seaman , S R , Shabaan , S , Shepherd , J G , Smollett , K , Templeton , K , Wastnedge , E , Wilkie , C , Williams , T , The COVID-19 Genomics UK (COG-UK) Consortium & Thomson , E C 2023 , ' Directions of change in intrinsic case severity across successive SARS-CoV-2 variant waves have been inconsistent ' , Journal of Infection , vol. 87 , no. 2 , pp. 128-135 . https://doi.org/10.1016/j.jinf.2023.05.019en
dc.identifier.issn0163-4453
dc.identifier.otherRIS: urn:20F5CBE4FFBE86703B223DB54FAEDF19
dc.identifier.otherORCID: /0000-0002-4958-2166/work/137915492
dc.identifier.urihttps://hdl.handle.net/10023/29972
dc.descriptionFunding: This work was supported by UKRI through the JUNIPER consortium (grant number MR/V038613/1, https://maths.org/juniper/); the Medical Research Council (MRC) (grant number MC UU 12014/12, grant number MC UU 00002/11, https://www.ukri.org/councils/mrc/); the G2P-UK National Virology Consortium (grant number MR/W005611/1, https://www.ukri.org).en
dc.description.abstractObjectives To determine how the intrinsic severity of successively dominant SARS-CoV-2 variants changed over the course of the pandemic. Methods A retrospective cohort analysis in the NHS Greater Glasgow and Clyde (NHS GGC) Health Board. All sequenced non-nosocomial adult COVID-19 cases in NHS GGC with relevant SARS-CoV-2 lineages (B.1.177/Alpha, Alpha/Delta, AY.4.2 Delta/non-AY.4.2 Delta, non-AY.4.2 Delta/Omicron, and BA.1 Omicron/BA.2 Omicron) during analysis periods were included. Outcome measures were hospital admission, ICU admission, or death within 28 days of positive COVID-19 test. We report the cumulative odds ratio; the ratio of the odds that an individual experiences a severity event of a given level vs all lower severity levels for the resident and the replacement variant after adjustment. Results After adjustment for covariates, the cumulative odds ratio was 1.51 (95% CI: 1.08-2.11) for Alpha versus B.1.177, 2.09 (95% CI: 1.42-3.08) for Delta versus Alpha, 0.99 (95% CI: 0.76-1.27) for AY.4.2 Delta versus non-AY.4.2 Delta, 0.49 (95% CI: 0.22-1.06) for Omicron versus non-AY.4.2 Delta, and 0.86 (95% CI: 0.68-1.09) for BA.2 Omicron versus BA.1 Omicron. Conclusions The direction of change in intrinsic severity between successively emerging SARS-CoV-2 variants was inconsistent, reminding us that the intrinsic severity of future SARS-CoV-2 variants remains uncertain.
dc.format.extent8
dc.format.extent190461
dc.language.isoeng
dc.relation.ispartofJournal of Infectionen
dc.subjectIntrinsic severityen
dc.subjectCOVID-19en
dc.subjectSARS-CoV-2en
dc.subjectAlpha varianten
dc.subjectDelta varianten
dc.subjectOmicron varianten
dc.subjectRA0421 Public health. Hygiene. Preventive Medicineen
dc.subject3rd-DASen
dc.subjectMCCen
dc.subjectACen
dc.subject.lccRA0421en
dc.titleDirections of change in intrinsic case severity across successive SARS-CoV-2 variant waves have been inconsistenten
dc.typeJournal articleen
dc.contributor.institutionUniversity of St Andrews. School of Medicineen
dc.contributor.institutionUniversity of St Andrews. Biomedical Sciences Research Complexen
dc.contributor.institutionUniversity of St Andrews. St Andrews Bioinformatics Uniten
dc.contributor.institutionUniversity of St Andrews. Infection and Global Health Divisionen
dc.identifier.doi10.1016/j.jinf.2023.05.019
dc.description.statusPeer revieweden
dc.date.embargoedUntil2024-06-01


This item appears in the following Collection(s)

Show simple item record