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dc.contributor.authorMohammadi, Mahnaz
dc.contributor.authorFell, Christina
dc.contributor.authorMorrison, David
dc.contributor.authorSyed, Sheeba
dc.contributor.authorKonanahalli, Prakash
dc.contributor.authorBell, Sarah
dc.contributor.authorBryson, Gareth
dc.contributor.authorArandjelović, Ognjen
dc.contributor.authorHarrison, David J.
dc.contributor.authorHarris-Birtill, David
dc.date.accessioned2024-05-01T10:30:12Z
dc.date.available2024-05-01T10:30:12Z
dc.date.issued2024-04-22
dc.identifier301723613
dc.identifier2864314e-c0c0-4990-ba3f-1a23efa15f6e
dc.identifier.citationMohammadi , M , Fell , C , Morrison , D , Syed , S , Konanahalli , P , Bell , S , Bryson , G , Arandjelović , O , Harrison , D J & Harris-Birtill , D 2024 , ' Automated reporting of cervical biopsies using artificial intelligence ' , PLOS Digital Health , vol. 3 , no. 4 , e0000381 . https://doi.org/10.1371/journal.pdig.0000381en
dc.identifier.issn2767-3170
dc.identifier.otherRIS: urn:B9ACE4D1D9E06959C940C87AE86EA4AC
dc.identifier.otherORCID: /0000-0001-9041-9988/work/159009907
dc.identifier.otherORCID: /0000-0001-5502-9773/work/159010992
dc.identifier.otherORCID: /0000-0002-0740-3668/work/159011010
dc.identifier.urihttps://hdl.handle.net/10023/29780
dc.descriptionFunding: For all authors this work is supported by the Industrial Centre for AI Research in digital Diagnostics (iCAIRD) which is funded by Innovate UK on behalf of UK Research and Innovation (UKRI) [project number: 104690], and in part by Chief Scientist Office, Scotland. DJH, DHB, OA and GB received funding from UKRI (funder project reference: TS/S013121/1). MM, DM and CF received salaries from UKRI for this project.en
dc.description.abstractWhen detected at an early stage, the 5-year survival rate for people with invasive cervical cancer is 92%. Being aware of signs and symptoms of cervical cancer and early detection greatly improve the chances of successful treatment. We have developed an Artificial Intelligence (AI) algorithm, trained and evaluated on cervical biopsies for automated reporting of digital diagnostics. The aim is to increase overall efficiency of pathological diagnosis and to have the performance tuned to high sensitivity for malignant cases. Having a tool for triage/identifying cancer and high grade lesions may potentially reduce reporting time by identifying areas of interest in a slide for the pathologist and therefore improving efficiency. We trained and validated our algorithm on 1738 cervical WSIs with one WSI per patient. On the independent test set of 811 WSIs, we achieved 93.4% malignant sensitivity for classifying slides. Recognising a WSI, with our algorithm, takes approximately 1.5 minutes on the NVIDIA Tesla V100 GPU. Whole slide images of different formats (TIFF, iSyntax, and CZI) can be processed using this code, and it is easily extendable to other formats.
dc.format.extent2621583
dc.language.isoeng
dc.relation.ispartofPLOS Digital Healthen
dc.subjectDASen
dc.subjectSDG 3 - Good Health and Well-beingen
dc.titleAutomated reporting of cervical biopsies using artificial intelligenceen
dc.typeJournal articleen
dc.contributor.sponsorTechnology Strategy Boarden
dc.contributor.institutionUniversity of St Andrews. School of Medicineen
dc.contributor.institutionUniversity of St Andrews. Statisticsen
dc.contributor.institutionUniversity of St Andrews. School of Computer Scienceen
dc.contributor.institutionUniversity of St Andrews. Sir James Mackenzie Institute for Early Diagnosisen
dc.contributor.institutionUniversity of St Andrews. Cellular Medicine Divisionen
dc.contributor.institutionUniversity of St Andrews. Centre for Research into Ecological & Environmental Modellingen
dc.identifier.doi10.1371/journal.pdig.0000381
dc.description.statusPeer revieweden
dc.identifier.grantnumberTS/S013121/1en


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