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cazy_webscraper : for creating a local CAZy database

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dc.contributor.authorHobbs, Emma Elizabeth Mary
dc.contributor.authorPritchard, Leighton
dc.contributor.authorChapman, Sean
dc.contributor.authorGloster, Tracey
dc.date.accessioned2022-01-06T15:30:11Z
dc.date.available2022-01-06T15:30:11Z
dc.date.issued2021-04-26
dc.identifier274923982
dc.identifierfae0ac55-4125-4534-a2d7-1a1122292e00
dc.identifier.citationHobbs , E E M , Pritchard , L , Chapman , S & Gloster , T 2021 , ' cazy_webscraper : for creating a local CAZy database ' , Microbiology Society Annual Conference , 26/04/21 - 30/04/21 .en
dc.identifier.citationconferenceen
dc.identifier.otherORCID: /0000-0002-8470-4739/work/96817695
dc.identifier.urihttps://hdl.handle.net/10023/24613
dc.description.abstractCarbohydrate Active enZymes (CAZymes) are pivotal in pathogen recognition, signalling, structure and energy metabolism. CAZy (www.cazy.org) is the most comprehensive CAZyme database, but it does not provide methods for automating data retrieval or submitting sequences for annotation. cazy_webscraper retrieves user-specified datasets from CAZy, producing a local SQL database enabling thorough interrogation of the data. cazy_webscraper can also retrieve protein sequences from GenBank and download structure files from RCSB PDB.
dc.format.extent1062745
dc.language.isoeng
dc.subjectCAZyen
dc.subjectCAZymesen
dc.subjectWebscraperen
dc.subjectQR Microbiologyen
dc.subjectZA4450 Databasesen
dc.subject.lccQRen
dc.subject.lccZA4450en
dc.titlecazy_webscraper : for creating a local CAZy databaseen
dc.typeConference posteren
dc.contributor.institutionUniversity of St Andrews. School of Biologyen
dc.contributor.institutionUniversity of St Andrews. Biomedical Sciences Research Complexen
dc.description.statusNon peer revieweden
dc.identifier.urlhttps://doi.org/10.6084/m9.figshare.14370860.v7en
dc.identifier.urlhttps://doi.org/10.6084/m9.figshare.14370869.v3en


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