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Effective use of the McNemar test

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PemburySmith_2020_BES_McNemartest_CC.pdf (451.7Kb)
Date
10/10/2020
Author
Pembury Smith, Matilda
Ruxton, Graeme D.
Keywords
McNemar test
Binomial data
P value
Significance testing
Meta-analysis
QH301 Biology
T-DAS
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Abstract
It is not uncommon for researchers to want to interrogate paired binomial data. For example, researchers may want to compare an organism’s response (positive or negative) to two different stimuli. If they apply both stimuli to a sample of individuals, it would be natural to present the data in a 2 × 2 table. There would be two cells with concordant results (the frequency of individuals which responded positively or negatively to both stimuli) and two cells with discordant results (the frequency of individuals who responded positively to one stimulus, but negatively to the other). The key issue is whether the totals in the two discordant cells are sufficiently different to suggest that the stimuli trigger different reactions. In terms of the null hypothesis testing paradigm, this would translate as a P value which is the probability of seeing the observed difference in these two values or a more extreme difference if the two stimuli produced an identical reaction. The statistical test designed to provide this P value is the McNemar test. Here, we seek to promote greater and better use of the McNemar test. To achieve this, we fully describe a range of circumstances within biological research where it can be effectively applied, describe the different variants of the test that exist, explain how these variants can be accessed in R, and offer guidance on which of these variants to adopt. To support our arguments, we highlight key recent methodological advances and compare these with a novel survey of current usage of the test.
Citation
Pembury Smith , M & Ruxton , G D 2020 , ' Effective use of the McNemar test ' , Behavioral Ecology and Sociobiology , vol. 74 , 133 . https://doi.org/10.1007/s00265-020-02916-y
Publication
Behavioral Ecology and Sociobiology
Status
Peer reviewed
DOI
https://doi.org/10.1007/s00265-020-02916-y
ISSN
0340-5443
Type
Journal article
Rights
Copyright © The Author(s) 2020. Open Access. This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.
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  • University of St Andrews Research
URI
http://hdl.handle.net/10023/20769

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