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dc.contributor.authorKapun, Martin
dc.contributor.authorBarrón, Maite G.
dc.contributor.authorStaubach, Fabian
dc.contributor.authorObbard, Darren J.
dc.contributor.authorWiberg, R. Axel W.
dc.contributor.authorVieira, Jorge
dc.contributor.authorGoubert, Clément
dc.contributor.authorRota-Stabelli, Omar
dc.contributor.authorKankare, Maaria
dc.contributor.authorBogaerts-Márquez, María
dc.contributor.authorHaudry, Annabelle
dc.contributor.authorWaidele, Lena
dc.contributor.authorKozeretska, Iryna
dc.contributor.authorPasyukova, Elena G.
dc.contributor.authorLoeschcke, Volker
dc.contributor.authorPascual, Marta
dc.contributor.authorVieira, Cristina P.
dc.contributor.authorSerga, Svitlana
dc.contributor.authorMontchamp-Moreau, Catherine
dc.contributor.authorAbbott, Jessica
dc.contributor.authorGibert, Patricia
dc.contributor.authorPorcelli, Damiano
dc.contributor.authorPosnien, Nico
dc.contributor.authorSánchez-Gracia, Alejandro
dc.contributor.authorGrath, Sonja
dc.contributor.authorSucena, Élio
dc.contributor.authorBergland, Alan O.
dc.contributor.authorGuerreiro, Maria Pilar Garcia
dc.contributor.authorOnder, Banu Sebnem
dc.contributor.authorArgyridou, Eliza
dc.contributor.authorGuio, Lain
dc.contributor.authorSchou, Mads Fristrup
dc.contributor.authorDeplancke, Bart
dc.contributor.authorVieira, Cristina
dc.contributor.authorRitchie, Michael G.
dc.contributor.authorZwaan, Bas J.
dc.contributor.authorTauber, Eran
dc.contributor.authorOrengo, Dorcas J.
dc.contributor.authorPuerma, Eva
dc.contributor.authorAguadé, Montserrat
dc.contributor.authorSchmidt, Paul
dc.contributor.authorParsch, John
dc.contributor.authorBetancourt, Andrea J.
dc.contributor.authorFlatt, Thomas
dc.contributor.authorGonzález, Josefa
dc.identifier.citationKapun , M , Barrón , M G , Staubach , F , Obbard , D J , Wiberg , R A W , Vieira , J , Goubert , C , Rota-Stabelli , O , Kankare , M , Bogaerts-Márquez , M , Haudry , A , Waidele , L , Kozeretska , I , Pasyukova , E G , Loeschcke , V , Pascual , M , Vieira , C P , Serga , S , Montchamp-Moreau , C , Abbott , J , Gibert , P , Porcelli , D , Posnien , N , Sánchez-Gracia , A , Grath , S , Sucena , É , Bergland , A O , Guerreiro , M P G , Onder , B S , Argyridou , E , Guio , L , Schou , M F , Deplancke , B , Vieira , C , Ritchie , M G , Zwaan , B J , Tauber , E , Orengo , D J , Puerma , E , Aguadé , M , Schmidt , P , Parsch , J , Betancourt , A J , Flatt , T & González , J 2020 , ' Genomic analysis of European Drosophila melanogaster populations reveals longitudinal structure, continent-wide selection, and previously unknown DNA viruses ' , Molecular Biology and Evolution , vol. 37 , no. 9 , pp. 2661-2678 .
dc.identifier.otherPURE: 270228998
dc.identifier.otherPURE UUID: 465393ec-e471-44c6-ad02-9ad0b6a322dc
dc.identifier.otherScopus: 85090025034
dc.identifier.otherPubMed: 32413142
dc.identifier.otherORCID: /0000-0001-7913-8675/work/80620093
dc.identifier.otherWOS: 000574386500016
dc.description.abstractGenetic variation is the fuel of evolution, with standing genetic variation especially important for short-term evolution and local adaptation. To date, studies of spatiotemporal patterns of genetic variation in natural populations have been challenging, as comprehensive sampling is logistically difficult, and sequencing of entire populations costly. Here, we address these issues using a collaborative approach, sequencing 48 pooled population samples from 32 locations, and perform the first continent-wide genomic analysis of genetic variation in European Drosophila melanogaster. Our analyses uncover longitudinal population structure, provide evidence for continent-wide selective sweeps, identify candidate genes for local climate adaptation, and document clines in chromosomal inversion and transposable element frequencies. We also characterize variation among populations in the composition of the fly microbiome, and identify five new DNA viruses in our samples.
dc.relation.ispartofMolecular Biology and Evolutionen
dc.rightsCopyright © The Author(s) 2020. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (, which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.comen
dc.subjectPopulation genomicsen
dc.subjectStructural variantsen
dc.subjectQH301 Biologyen
dc.subjectEcology, Evolution, Behavior and Systematicsen
dc.subjectMolecular Biologyen
dc.titleGenomic analysis of European Drosophila melanogaster populations reveals longitudinal structure, continent-wide selection, and previously unknown DNA virusesen
dc.typeJournal articleen
dc.description.versionPublisher PDFen
dc.contributor.institutionUniversity of St Andrews.Centre for Biological Diversityen
dc.contributor.institutionUniversity of St Andrews.School of Biologyen
dc.contributor.institutionUniversity of St Andrews.Institute of Behavioural and Neural Sciencesen
dc.description.statusPeer revieweden

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