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Halogen bonding with the halogenabenzene bird structure, halobenzene and halocyclopentadiene

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Date
15/09/2019
Author
Cates, Emma L.
van Mourik, Tanja
Keywords
Halogen bond
Halogenabenzene
Halobenzene
Halocyclopentadiene
Double hybrid density functional theory
QD Chemistry
DAS
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Abstract
The ability of the “bird-like” halogenabenzene molecule, referred to as X-bird (X= Cl to At), to form halogen-bonded complexes with the nucleophiles H2O and NH3 was investigated using double-hybrid density functional theory and the aug-cc-pVTZ/aug-cc-pVTZ-PP basis set. The structures and interaction energies were compared with 5-halocyclopenta-1,3-diene (halocyclopentadiene; an isomer of halogenabenzene) and halobenzene, also complexed with H2O and NH3. The unusual structure of the X-bird, with the halogen bonded to two carbon atoms, results in two distinct σ-holes, roughly at the extension of the C-X bonds. Based on the behaviour of the interaction energy (which increases for heavier halogens) and van der Waals (vdW) ratio (which decreases for heavier halogens), it is concluded that the X-bird forms proper halogen bonds with H2O and NH3. The interaction energies are larger than those of the halogen-bonded complexes involving halobenzene and halocyclopentadiene, presumably due to the presence of a secondary interaction.
Citation
Cates , E L & van Mourik , T 2019 , ' Halogen bonding with the halogenabenzene bird structure, halobenzene and halocyclopentadiene ' , Journal of Computational Chemistry , vol. 40 , no. 24 , pp. 2111-2118 . https://doi.org/10.1002/jcc.25863
Publication
Journal of Computational Chemistry
Status
Peer reviewed
DOI
https://doi.org/10.1002/jcc.25863
ISSN
0192-8651
Type
Journal article
Rights
Copyright © 2019 Wiley Periodicals, Inc. This work has been made available online in accordance with the publisher’s policies. This is the author created, accepted version manuscript following peer review and may differ slightly from the final published version. The final published version of this work is available at https://doi.org/10.1002/jcc.25863
Description
We thank EastCHEM for support via the EaStCHEM Research Computing Facility. The research data supporting this publication cab be accessed at https://doi.org/10.17630/a3b1f172-dd54-4df1-a498-9951cfce9cee.
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  • University of St Andrews Research
URI
http://hdl.handle.net/10023/20007

Items in the St Andrews Research Repository are protected by copyright, with all rights reserved, unless otherwise indicated.

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