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dc.contributor.authorGupta, Roopam
dc.contributor.authorChen, Mingzhou
dc.contributor.authorMalcolm, Graeme P. A.
dc.contributor.authorHempler, Nils
dc.contributor.authorDholakia, Kishan
dc.contributor.authorPowis, Simon John
dc.date.accessioned2019-04-30T13:30:45Z
dc.date.available2019-04-30T13:30:45Z
dc.date.issued2019-05-13
dc.identifier258306534
dc.identifierc167eb68-17c1-4aa7-8d48-5b37d5894cd3
dc.identifier85065831289
dc.identifier000469220500012
dc.identifier.citationGupta , R , Chen , M , Malcolm , G P A , Hempler , N , Dholakia , K & Powis , S J 2019 , ' Label-free optical hemogram of granulocytes enhanced by artificial neural networks ' , Optics Express , vol. 27 , no. 10 , pp. 13706-13720 . https://doi.org/10.1364/OE.27.013706en
dc.identifier.issn1094-4087
dc.identifier.otherORCID: /0000-0002-6190-5167/work/57088508
dc.identifier.otherORCID: /0000-0002-3267-9009/work/57088538
dc.identifier.otherORCID: /0000-0003-4218-2984/work/60195302
dc.identifier.urihttps://hdl.handle.net/10023/17612
dc.descriptionFunding: Medical Research Scotland (PhD873-2015) and the UK Engineering and Physical Sciences Research Council through grants EP/R004854/1 and EP/P030017/1.en
dc.description.abstractAn outstanding challenge for immunology is the classification of immune cells in a label-free fashion with high speed. For this purpose, optical techniques such as Raman spectroscopy or digital holographic microscopy have been used successfully to identify immune cell subsets. To achieve high accuracy, these techniques require a post-processing step using linear methods of multivariate processing, such as principal component analysis. Here we demonstrate for the first time a comparison between artificial neural networks and principal component analysis (PCA) to classify the key granulocyte cell lineages of neutrophils and eosinophils using both digital holographic microscopy and Raman spectroscopy. Artificial neural networks can offer advantages in terms of classification accuracy and speed over a PCA approach. We conclude that digital holographic microscopy with convolutional neural networks based analysis provides a route to a robust, stand-alone and high-throughput hemogram with a classification accuracy of 91.3 % at a throughput rate of greater than 100 cells per second.
dc.format.extent15
dc.format.extent2624545
dc.language.isoeng
dc.relation.ispartofOptics Expressen
dc.subjectDeep learningen
dc.subjectMachine Learningen
dc.subjectArtificial Neural Networksen
dc.subjectRaman Spectroscopyen
dc.subjectDigital holographic microscopyen
dc.subjectimmunologyen
dc.subjectQA75 Electronic computers. Computer scienceen
dc.subjectQC Physicsen
dc.subjectQR180 Immunologyen
dc.subjectT Technologyen
dc.subjectDASen
dc.subject.lccQA75en
dc.subject.lccQCen
dc.subject.lccQR180en
dc.subject.lccTen
dc.titleLabel-free optical hemogram of granulocytes enhanced by artificial neural networksen
dc.typeJournal articleen
dc.contributor.sponsorEPSRCen
dc.contributor.sponsorEPSRCen
dc.contributor.institutionUniversity of St Andrews. School of Medicineen
dc.contributor.institutionUniversity of St Andrews. School of Physics and Astronomyen
dc.contributor.institutionUniversity of St Andrews. Biomedical Sciences Research Complexen
dc.contributor.institutionUniversity of St Andrews. Cellular Medicine Divisionen
dc.contributor.institutionUniversity of St Andrews. Centre for Biophotonicsen
dc.identifier.doihttps://doi.org/10.1364/OE.27.013706
dc.description.statusPeer revieweden
dc.identifier.grantnumberEP/R004854/1en
dc.identifier.grantnumberEP/P030017/1en


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