An open resource for non-human primate imaging
Abstract
Non-human primate neuroimaging is a rapidly growing area of research that promises to transform and scale translational and cross-species comparative neuroscience. Unfortunately, the technological and methodological advances of the past two decades have outpaced the accrual of data, which is particularly challenging given the relatively few centers that have the necessary facilities and capabilities. The PRIMatE Data Exchange (PRIME-DE) addresses this challenge by aggregating independently acquired non-human primate magnetic resonance imaging (MRI) datasets and openly sharing them via the International Neuroimaging Data-sharing Initiative (INDI). Here, we present the rationale, design, and procedures for the PRIME-DE consortium, as well as the initial release, consisting of 25 independent data collections aggregated across 22 sites (total = 217 non-human primates). We also outline the unique pitfalls and challenges that should be considered in the analysis of non-human primate MRI datasets, including providing automated quality assessment of the contributed datasets.
Citation
Milham , M P , Ai , L , Koo , B , Xu , T , Amiez , C , Balezeau , F , Baxter , M G , Blezer , E L A , Brochier , T , Chen , A , Croxson , P L , Damatac , C G , Dehaene , S , Everling , S , Fair , D A , Fleysher , L , Freiwald , W , Froudist-Walsh , S , Griffiths , T D , Guedj , C , Hadj-Bouziane , F , Ben Hamed , S , Harel , N , Hiba , B , Jarraya , B , Jung , B , Kastner , S , Klink , P C , Kwok , S C , Laland , K N , Leopold , D A , Lindenfors , P , Mars , R B , Menon , R S , Messinger , A , Meunier , M , Mok , K , Morrison , J H , Nacef , J , Nagy , J , Rios , M O , Petkov , C I , Pinsk , M , Poirier , C , Procyk , E , Rajimehr , R , Reader , S M , Roelfsema , P R , Rudko , D A , Rushworth , M F S , Russ , B E , Sallet , J , Schmid , M C , Schwiedrzik , C M , Seidlitz , J , Sein , J , Shmuel , A , Sullivan , E L , Ungerleider , L , Thiele , A , Todorov , O S , Tsao , D , Wang , Z , Wilson , C R E , Yacoub , E , Ye , F Q , Zarco , W , Zhou , Y , Margulies , D S & Schroeder , C E 2018 , ' An open resource for non-human primate imaging ' , Neuron , vol. 100 , no. 1 , e2 , pp. 61-74 . https://doi.org/10.1016/j.neuron.2018.08.039
Publication
Neuron
Status
Peer reviewed
ISSN
0896-6273Type
Journal article
Rights
Copyright © 2018 The Authors. Published by Elsevier Inc. This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
Description
Primary support for the work by E.L.A.B., O.S.T., P.L., K.N.L., and S.M.R. was provided by the John Templeton Foundation, the Canada Foundation for Innovation, and the Anna-Greta och Holger Crafoords Stiftelse.Collections
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