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BioTIME : a database of biodiversity time series for the Anthropocene

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dc.contributor.authorDornelas, Maria
dc.contributor.authorAntão, Laura H.
dc.contributor.authorMoyes, Faye
dc.contributor.authorBates, Amanda E.
dc.contributor.authorMagurran, Anne E.
dc.contributor.authorAdam, Dušan
dc.contributor.authorAkhmetzhanova, Asem A.
dc.contributor.authorAppeltans, Ward
dc.contributor.authorArcos, José Manuel
dc.contributor.authorArnold, Haley
dc.contributor.authorAyyappan, Narayanan
dc.contributor.authorBadihi, Gal
dc.contributor.authorBaird, Andrew H.
dc.contributor.authorBarbosa, Miguel
dc.contributor.authorBarreto, Tiago Egydio
dc.contributor.authorBässler, Claus
dc.contributor.authorBellgrove, Alecia
dc.contributor.authorBelmaker, Jonathan
dc.contributor.authorBenedetti-cecchi, Lisandro
dc.contributor.authorBett, Brian J.
dc.contributor.authorBjorkman, Anne D.
dc.contributor.authorBłażewicz, Magdalena
dc.contributor.authorBlowes, Shane A.
dc.contributor.authorBloch, Christopher P.
dc.contributor.authorBonebrake, Timothy C.
dc.contributor.authorBoyd, Susan
dc.contributor.authorBradford, Matt
dc.contributor.authorBrooks, Andrew J.
dc.contributor.authorBrown, James H.
dc.contributor.authorBruelheide, Helge
dc.contributor.authorBudy, Phaedra
dc.contributor.authorCarvalho, Fernando
dc.contributor.authorCastañeda-moya, Edward
dc.contributor.authorChen, Chaolun Allen
dc.contributor.authorChamblee, John F.
dc.contributor.authorChase, Tory J.
dc.contributor.authorSiegwart Collier, Laura
dc.contributor.authorCollinge, Sharon K.
dc.contributor.authorCondit, Richard
dc.contributor.authorCooper, Elisabeth J.
dc.contributor.authorCornelissen, J. Hans C.
dc.contributor.authorCotano, Unai
dc.contributor.authorKyle Crow, Shannan
dc.contributor.authorDamasceno, Gabriella
dc.contributor.authorDavies, Claire H.
dc.contributor.authorDavis, Robert A.
dc.contributor.authorDay, Frank P.
dc.contributor.authorDegraer, Steven
dc.contributor.authorDoherty, Tim S.
dc.contributor.authorDunn, Timothy E.
dc.contributor.authorDurigan, Giselda
dc.contributor.authorDuffy, J. Emmett
dc.contributor.authorEdelist, Dor
dc.contributor.authorEdgar, Graham J.
dc.contributor.authorElahi, Robin
dc.contributor.authorElmendorf, Sarah C.
dc.contributor.authorEnemar, Anders
dc.contributor.authorErnest, S. K. Morgan
dc.contributor.authorEscribano, Rubén
dc.contributor.authorEstiarte, Marc
dc.contributor.authorEvans, Brian S.
dc.contributor.authorFan, Tung-yung
dc.contributor.authorTurini Farah, Fabiano
dc.contributor.authorLoureiro Fernandes, Luiz
dc.contributor.authorFarneda, Fábio Z.
dc.contributor.authorFidelis, Alessandra
dc.contributor.authorFitt, Robert
dc.contributor.authorFosaa, Anna Maria
dc.contributor.authorDaher Correa Franco, Geraldo Antonio
dc.contributor.authorFrank, Grace E.
dc.contributor.authorFraser, William R.
dc.contributor.authorGarcía, Hernando
dc.contributor.authorCazzolla Gatti, Roberto
dc.contributor.authorGivan, Or
dc.contributor.authorGorgone-barbosa, Elizabeth
dc.contributor.authorGould, William A.
dc.contributor.authorGries, Corinna
dc.contributor.authorGrossman, Gary D.
dc.contributor.authorGutierréz, Julio R.
dc.contributor.authorHale, Stephen
dc.contributor.authorHarmon, Mark E.
dc.contributor.authorHarte, John
dc.contributor.authorHaskins, Gary
dc.contributor.authorHenshaw, Donald L.
dc.contributor.authorHermanutz, Luise
dc.contributor.authorHidalgo, Pamela
dc.contributor.authorHiguchi, Pedro
dc.contributor.authorHoey, Andrew
dc.contributor.authorVan Hoey, Gert
dc.contributor.authorHofgaard, Annika
dc.contributor.authorHoleck, Kristen
dc.contributor.authorHollister, Robert D.
dc.contributor.authorHolmes, Richard
dc.contributor.authorHoogenboom, Mia
dc.contributor.authorHsieh, Chih-hao
dc.contributor.authorHubbell, Stephen P.
dc.contributor.authorHuettmann, Falk
dc.contributor.authorHuffard, Christine L.
dc.contributor.authorHurlbert, Allen H.
dc.contributor.authorMacedo Ivanauskas, Natália
dc.contributor.authorJaník, David
dc.contributor.authorJandt, Ute
dc.contributor.authorJażdżewska, Anna
dc.contributor.authorJohannessen, Tore
dc.contributor.authorJohnstone, Jill
dc.contributor.authorJones, Julia
dc.contributor.authorJones, Faith A. M.
dc.contributor.authorKang, Jungwon
dc.contributor.authorKartawijaya, Tasrif
dc.contributor.authorKeeley, Erin C.
dc.contributor.authorKelt, Douglas A.
dc.contributor.authorKinnear, Rebecca
dc.contributor.authorKlanderud, Kari
dc.contributor.authorKnutsen, Halvor
dc.contributor.authorKoenig, Christopher C.
dc.contributor.authorKortz, Alessandra R.
dc.contributor.authorKrál, Kamil
dc.contributor.authorKuhnz, Linda A.
dc.contributor.authorKuo, Chao-yang
dc.contributor.authorKushner, David J.
dc.contributor.authorLaguionie-marchais, Claire
dc.contributor.authorLancaster, Lesley T.
dc.contributor.authorMin Lee, Cheol
dc.contributor.authorLefcheck, Jonathan S.
dc.contributor.authorLévesque, Esther
dc.contributor.authorLightfoot, David
dc.contributor.authorLloret, Francisco
dc.contributor.authorLloyd, John D.
dc.contributor.authorLópez-baucells, Adrià
dc.contributor.authorLouzao, Maite
dc.contributor.authorMadin, Joshua S.
dc.contributor.authorMagnússon, Borgþór
dc.contributor.authorMalamud, Shahar
dc.contributor.authorMatthews, Iain
dc.contributor.authorMcfarland, Kent P.
dc.contributor.authorMcgill, Brian
dc.contributor.authorMcknight, Diane
dc.contributor.authorMclarney, William O.
dc.contributor.authorMeador, Jason
dc.contributor.authorMeserve, Peter L.
dc.contributor.authorMetcalfe, Daniel J.
dc.contributor.authorMeyer, Christoph F. J.
dc.contributor.authorMichelsen, Anders
dc.contributor.authorMilchakova, Nataliya
dc.contributor.authorMoens, Tom
dc.contributor.authorMoland, Even
dc.contributor.authorMoore, Jon
dc.contributor.authorMathias Moreira, Carolina
dc.contributor.authorMüller, Jörg
dc.contributor.authorMurphy, Grace
dc.contributor.authorMyers-smith, Isla H.
dc.contributor.authorMyster, Randall W.
dc.contributor.authorNaumov, Andrew
dc.contributor.authorNeat, Francis
dc.contributor.authorNelson, James A.
dc.contributor.authorPaul Nelson, Michael
dc.contributor.authorNewton, Stephen F.
dc.contributor.authorNorden, Natalia
dc.contributor.authorOliver, Jeffrey C.
dc.contributor.authorOlsen, Esben M.
dc.contributor.authorOnipchenko, Vladimir G.
dc.contributor.authorPabis, Krzysztof
dc.contributor.authorPabst, Robert J.
dc.contributor.authorPaquette, Alain
dc.contributor.authorPardede, Sinta
dc.contributor.authorPaterson, David M.
dc.contributor.authorPélissier, Raphaël
dc.contributor.authorPeñuelas, Josep
dc.contributor.authorPérez-matus, Alejandro
dc.contributor.authorPizarro, Oscar
dc.contributor.authorPomati, Francesco
dc.contributor.authorPost, Eric
dc.contributor.authorPrins, Herbert H. T.
dc.contributor.authorPriscu, John C.
dc.contributor.authorProvoost, Pieter
dc.contributor.authorPrudic, Kathleen L.
dc.contributor.authorPulliainen, Erkki
dc.contributor.authorRamesh, B. R.
dc.contributor.authorMendivil Ramos, Olivia
dc.contributor.authorRassweiler, Andrew
dc.contributor.authorRebelo, Jose Eduardo
dc.contributor.authorReed, Daniel C.
dc.contributor.authorReich, Peter B.
dc.contributor.authorRemillard, Suzanne M.
dc.contributor.authorRichardson, Anthony J.
dc.contributor.authorRichardson, J. Paul
dc.contributor.authorVan Rijn, Itai
dc.contributor.authorRocha, Ricardo
dc.contributor.authorRivera-monroy, Victor H.
dc.contributor.authorRixen, Christian
dc.contributor.authorRobinson, Kevin P.
dc.contributor.authorRibeiro Rodrigues, Ricardo
dc.contributor.authorDe Cerqueira Rossa-feres, Denise
dc.contributor.authorRudstam, Lars
dc.contributor.authorRuhl, Henry
dc.contributor.authorRuz, Catalina S.
dc.contributor.authorSampaio, Erica M.
dc.contributor.authorRybicki, Nancy
dc.contributor.authorRypel, Andrew
dc.contributor.authorSal, Sofia
dc.contributor.authorSalgado, Beatriz
dc.contributor.authorSantos, Flavio A. M.
dc.contributor.authorSavassi-coutinho, Ana Paula
dc.contributor.authorScanga, Sara
dc.contributor.authorSchmidt, Jochen
dc.contributor.authorSchooley, Robert
dc.contributor.authorSetiawan, Fakhrizal
dc.contributor.authorShao, Kwang-tsao
dc.contributor.authorShaver, Gaius R.
dc.contributor.authorSherman, Sally
dc.contributor.authorSherry, Thomas W.
dc.contributor.authorSiciński, Jacek
dc.contributor.authorSievers, Caya
dc.contributor.authorDa Silva, Ana Carolina
dc.contributor.authorRodrigues Da Silva, Fernando
dc.contributor.authorSilveira, Fabio L.
dc.contributor.authorSlingsby, Jasper
dc.contributor.authorSmart, Tracey
dc.contributor.authorSnell, Sara J.
dc.contributor.authorSoudzilovskaia, Nadejda A.
dc.contributor.authorSouza, Gabriel B. G.
dc.contributor.authorMaluf Souza, Flaviana
dc.contributor.authorCastro Souza, Vinícius
dc.contributor.authorStallings, Christopher D.
dc.contributor.authorStanforth, Rowan
dc.contributor.authorStanley, Emily H.
dc.contributor.authorMauro Sterza, José
dc.contributor.authorStevens, Maarten
dc.contributor.authorStuart-smith, Rick
dc.contributor.authorRondon Suarez, Yzel
dc.contributor.authorSupp, Sarah
dc.contributor.authorYoshio Tamashiro, Jorge
dc.contributor.authorTarigan, Sukmaraharja
dc.contributor.authorThiede, Gary P.
dc.contributor.authorThorn, Simon
dc.contributor.authorTolvanen, Anne
dc.contributor.authorTeresa Zugliani Toniato, Maria
dc.contributor.authorTotland, Ørjan
dc.contributor.authorTwilley, Robert R.
dc.contributor.authorVaitkus, Gediminas
dc.contributor.authorValdivia, Nelson
dc.contributor.authorVallejo, Martha Isabel
dc.contributor.authorValone, Thomas J.
dc.contributor.authorVan Colen, Carl
dc.contributor.authorVanaverbeke, Jan
dc.contributor.authorVenturoli, Fabio
dc.contributor.authorVerheye, Hans M.
dc.contributor.authorVianna, Marcelo
dc.contributor.authorVieira, Rui P.
dc.contributor.authorVrška, Tomáš
dc.contributor.authorQuang Vu, Con
dc.contributor.authorVan Vu, Lien
dc.contributor.authorWaide, Robert B.
dc.contributor.authorWaldock, Conor
dc.contributor.authorWatts, Dave
dc.contributor.authorWebb, Sara
dc.contributor.authorWesołowski, Tomasz
dc.contributor.authorWhite, Ethan P.
dc.contributor.authorWiddicombe, Claire E.
dc.contributor.authorWilgers, Dustin
dc.contributor.authorWilliams, Richard
dc.contributor.authorWilliams, Stefan B.
dc.contributor.authorWilliamson, Mark
dc.contributor.authorWillig, Michael R.
dc.contributor.authorWillis, Trevor J.
dc.contributor.authorWipf, Sonja
dc.contributor.authorWoods, Kerry D.
dc.contributor.authorWoehler, Eric J.
dc.contributor.authorZawada, Kyle
dc.contributor.authorZettler, Michael L.
dc.date.accessioned2018-07-27T14:30:06Z
dc.date.available2018-07-27T14:30:06Z
dc.date.issued2018-07-24
dc.identifier253403134
dc.identifier2fcf6acb-bd72-4465-8ffe-366901e55d60
dc.identifier85047177487
dc.identifier000439785700001
dc.identifier.citationDornelas , M , Antão , L H , Moyes , F , Bates , A E , Magurran , A E , Adam , D , Akhmetzhanova , A A , Appeltans , W , Arcos , J M , Arnold , H , Ayyappan , N , Badihi , G , Baird , A H , Barbosa , M , Barreto , T E , Bässler , C , Bellgrove , A , Belmaker , J , Benedetti-cecchi , L , Bett , B J , Bjorkman , A D , Błażewicz , M , Blowes , S A , Bloch , C P , Bonebrake , T C , Boyd , S , Bradford , M , Brooks , A J , Brown , J H , Bruelheide , H , Budy , P , Carvalho , F , Castañeda-moya , E , Chen , C A , Chamblee , J F , Chase , T J , Siegwart Collier , L , Collinge , S K , Condit , R , Cooper , E J , Cornelissen , J H C , Cotano , U , Kyle Crow , S , Damasceno , G , Davies , C H , Davis , R A , Day , F P , Degraer , S , Doherty , T S , Dunn , T E , Durigan , G , Duffy , J E , Edelist , D , Edgar , G J , Elahi , R , Elmendorf , S C , Enemar , A , Ernest , S K M , Escribano , R , Estiarte , M , Evans , B S , Fan , T , Turini Farah , F , Loureiro Fernandes , L , Farneda , F Z , Fidelis , A , Fitt , R , Fosaa , A M , Daher Correa Franco , G A , Frank , G E , Fraser , W R , García , H , Cazzolla Gatti , R , Givan , O , Gorgone-barbosa , E , Gould , W A , Gries , C , Grossman , G D , Gutierréz , J R , Hale , S , Harmon , M E , Harte , J , Haskins , G , Henshaw , D L , Hermanutz , L , Hidalgo , P , Higuchi , P , Hoey , A , Van Hoey , G , Hofgaard , A , Holeck , K , Hollister , R D , Holmes , R , Hoogenboom , M , Hsieh , C , Hubbell , S P , Huettmann , F , Huffard , C L , Hurlbert , A H , Macedo Ivanauskas , N , Janík , D , Jandt , U , Jażdżewska , A , Johannessen , T , Johnstone , J , Jones , J , Jones , F A M , Kang , J , Kartawijaya , T , Keeley , E C , Kelt , D A , Kinnear , R , Klanderud , K , Knutsen , H , Koenig , C C , Kortz , A R , Král , K , Kuhnz , L A , Kuo , C , Kushner , D J , Laguionie-marchais , C , Lancaster , L T , Min Lee , C , Lefcheck , J S , Lévesque , E , Lightfoot , D , Lloret , F , Lloyd , J D , López-baucells , A , Louzao , M , Madin , J S , Magnússon , B , Malamud , S , Matthews , I , Mcfarland , K P , Mcgill , B , Mcknight , D , Mclarney , W O , Meador , J , Meserve , P L , Metcalfe , D J , Meyer , C F J , Michelsen , A , Milchakova , N , Moens , T , Moland , E , Moore , J , Mathias Moreira , C , Müller , J , Murphy , G , Myers-smith , I H , Myster , R W , Naumov , A , Neat , F , Nelson , J A , Paul Nelson , M , Newton , S F , Norden , N , Oliver , J C , Olsen , E M , Onipchenko , V G , Pabis , K , Pabst , R J , Paquette , A , Pardede , S , Paterson , D M , Pélissier , R , Peñuelas , J , Pérez-matus , A , Pizarro , O , Pomati , F , Post , E , Prins , H H T , Priscu , J C , Provoost , P , Prudic , K L , Pulliainen , E , Ramesh , B R , Mendivil Ramos , O , Rassweiler , A , Rebelo , J E , Reed , D C , Reich , P B , Remillard , S M , Richardson , A J , Richardson , J P , Van Rijn , I , Rocha , R , Rivera-monroy , V H , Rixen , C , Robinson , K P , Ribeiro Rodrigues , R , De Cerqueira Rossa-feres , D , Rudstam , L , Ruhl , H , Ruz , C S , Sampaio , E M , Rybicki , N , Rypel , A , Sal , S , Salgado , B , Santos , F A M , Savassi-coutinho , A P , Scanga , S , Schmidt , J , Schooley , R , Setiawan , F , Shao , K , Shaver , G R , Sherman , S , Sherry , T W , Siciński , J , Sievers , C , Da Silva , A C , Rodrigues Da Silva , F , Silveira , F L , Slingsby , J , Smart , T , Snell , S J , Soudzilovskaia , N A , Souza , G B G , Maluf Souza , F , Castro Souza , V , Stallings , C D , Stanforth , R , Stanley , E H , Mauro Sterza , J , Stevens , M , Stuart-smith , R , Rondon Suarez , Y , Supp , S , Yoshio Tamashiro , J , Tarigan , S , Thiede , G P , Thorn , S , Tolvanen , A , Teresa Zugliani Toniato , M , Totland , Ø , Twilley , R R , Vaitkus , G , Valdivia , N , Vallejo , M I , Valone , T J , Van Colen , C , Vanaverbeke , J , Venturoli , F , Verheye , H M , Vianna , M , Vieira , R P , Vrška , T , Quang Vu , C , Van Vu , L , Waide , R B , Waldock , C , Watts , D , Webb , S , Wesołowski , T , White , E P , Widdicombe , C E , Wilgers , D , Williams , R , Williams , S B , Williamson , M , Willig , M R , Willis , T J , Wipf , S , Woods , K D , Woehler , E J , Zawada , K & Zettler , M L 2018 , ' BioTIME : a database of biodiversity time series for the Anthropocene ' , Global Ecology and Biogeography , vol. 27 , no. 7 , pp. 760-786 . https://doi.org/10.1111/geb.12729en
dc.identifier.issn1466-822X
dc.identifier.othercrossref: 10.1111/geb.12729
dc.identifier.otherORCID: /0000-0003-1174-6476/work/47136354
dc.identifier.otherORCID: /0000-0002-0036-2795/work/46939639
dc.identifier.otherORCID: /0000-0001-9687-0593/work/46939694
dc.identifier.otherORCID: /0000-0001-6571-714X/work/46939697
dc.identifier.otherORCID: /0000-0003-0327-9580/work/60630782
dc.identifier.urihttps://hdl.handle.net/10023/15720
dc.descriptionThe BioTIME database is accessible through the BioTIME website [http://biotime.st-andrews.ac.uk] and through the Zenodo repository [https://zenodo.org/record/1095627].en
dc.description.abstractMotivation: The BioTIME database contains raw data on species identities and abundances in ecological assemblages through time. These data enable users to calculate temporal trends in biodiversity within and amongst assemblages using a broad range of metrics. BioTIME is being developed as a community led open-source database of biodiversity time series. Our goal is to accelerate and facilitate quantitative analysis of temporal patterns of biodiversity in the Anthropocene. Main types of variables included: The database contains 8,777,413 species abundance records, from assemblages consistently sampled for a minimum of two, which need not necessarily be consecutive. In addition, the database contains metadata relating to sampling methodology and contextual information about each record. Spatial location and grain: BioTIME is a global database of 547,161 unique sampling locations spanning the marine, freshwater and terrestrial realms. Grain size varies across datasets from 0.0000000158 km2 (158 cm2) to 100 km2 (1 000 000 000 000 cm2). Time period and grain: BioTIME records span from 1874 to 2016. The minimum temporal grain across all datasets in BioTIME is year. Major taxa and level of measurement: BioTIME includes data from 44,440 species across the plant and animal kingdoms, ranging from plants, plankton, and terrestrial invertebrates to small and large vertebrates. Software format: .csv and .SQL
dc.format.extent27
dc.format.extent2421563
dc.language.isoeng
dc.relation.ispartofGlobal Ecology and Biogeographyen
dc.subjectBiodiversityen
dc.subjectGlobalen
dc.subjectSpatialen
dc.subjectSpecies richnessen
dc.subjectTemporalen
dc.subjectTurnoveren
dc.subjectQH301 Biologyen
dc.subjectZA4450 Databasesen
dc.subjectDASen
dc.subjectSDG 14 - Life Below Wateren
dc.subjectSDG 15 - Life on Landen
dc.subjectMCPen
dc.subject.lccQH301en
dc.subject.lccZA4450en
dc.titleBioTIME : a database of biodiversity time series for the Anthropoceneen
dc.typeJournal articleen
dc.contributor.sponsorThe Wellcome Trusten
dc.contributor.sponsorEuropean Research Councilen
dc.contributor.institutionUniversity of St Andrews. School of Biologyen
dc.contributor.institutionUniversity of St Andrews. Fish Behaviour and Biodiversity Research Groupen
dc.contributor.institutionUniversity of St Andrews. Marine Alliance for Science & Technology Scotlanden
dc.contributor.institutionUniversity of St Andrews. Centre for Biological Diversityen
dc.contributor.institutionUniversity of St Andrews. Institute of Behavioural and Neural Sciencesen
dc.contributor.institutionUniversity of St Andrews. St Andrews Sustainability Instituteen
dc.contributor.institutionUniversity of St Andrews. Centre for Research into Ecological & Environmental Modellingen
dc.contributor.institutionUniversity of St Andrews. Sediment Ecology Research Groupen
dc.contributor.institutionUniversity of St Andrews. Scottish Oceans Instituteen
dc.identifier.doi10.1111/geb.12729
dc.description.statusPeer revieweden
dc.identifier.grantnumber105621/Z/14/Zen
dc.identifier.grantnumber250189en


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