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dc.contributor.authorAzam, Khalide
dc.contributor.authorCadir, Nureisha
dc.contributor.authorMadeira, Carla
dc.contributor.authorGillespie, Stephen H.
dc.contributor.authorSabiiti, Wilber
dc.date.accessioned2018-02-19T16:30:06Z
dc.date.available2018-02-19T16:30:06Z
dc.date.issued2018-02-16
dc.identifier252066828
dc.identifier654644b3-76dd-40df-9d9d-31847d189d95
dc.identifier000532507000010
dc.identifier85081973306
dc.identifier.citationAzam , K , Cadir , N , Madeira , C , Gillespie , S H & Sabiiti , W 2018 , ' OMNIgene.SPUTUM suppresses contaminants whilst maintaining Mycobacterium tuberculosis viability and obviates cold-chain transport ' , ERJ Open Research , vol. 4 , 00074-2017 . https://doi.org/10.1183/23120541.00074-2017en
dc.identifier.issn2312-0541
dc.identifier.otherORCID: /0000-0001-6537-7712/work/42023880
dc.identifier.otherORCID: /0000-0002-4742-2791/work/60196330
dc.identifier.urihttps://hdl.handle.net/10023/12752
dc.descriptionThe study was funded by DNA Genotek Inc. Canada, the manufacturer of OMNIgene.SPUTUM (grant number SMD0-Z0B014).en
dc.description.abstractTuberculosis (TB) diagnostics are centralised, requiring long-distance transportation of specimens in most resource-limited settings. We evaluated the ability of OMNIgene.SPUTUM (OM-S) to obviate cold-chain transport of TB specimens. A two-arm (same-day and after 5 days sample processing) study was conducted to assess contamination rates and Mycobacterium tuberculosis viability in OM-S-treated samples against the standard decontamination procedure (SDP) in Mozambique, using Lowenstein Jensen (LJ) and mycobacterial growth indicator tube (MGIT) culture and molecular bacterial load assay. 270 specimens were processed using OM-S and SDP in same-day and 5-day arms. Contamination was lower in OM-S-treated than SDP-treated cultures: 12% versus 15% and 2% versus 27% in the same-day and 5-day arms, respectively. M. tuberculosis recovery in OM-S-treated LJ cultures was 10% and 56% higher in the same-day and 5-day arms, respectively, than SDP-treated cultures, but lower in MGIT (52% and 28% lower in the same-day and 5-day arms, respectively). M. tuberculosis viable count was 1log estimated CFU·mL−1 lower in 5-day OM-S-treated sputa. OM-S was more effective at liquefying sputum with a shorter sample processing time: 22 min for culture. OM-S is simple to use and has demonstrated a high potency to suppress contaminants, maintenance of viability at ambient temperatures and higher M. tuberculosis recovery, particularly in the solid LJ cultures. Optimisation of OM-S to achieve higher MGIT culture positivity and shorter time to result will increase its application and utility in the clinical management of TB.
dc.format.extent8
dc.format.extent474526
dc.language.isoeng
dc.relation.ispartofERJ Open Researchen
dc.subjectDiagnostic proceduresen
dc.subjectTuberculosisen
dc.subjectTuberculosis and mycobacterial infectionsen
dc.subjectRA0421 Public health. Hygiene. Preventive Medicineen
dc.subjectRC Internal medicineen
dc.subjectNDASen
dc.subjectSDG 3 - Good Health and Well-beingen
dc.subject.lccRA0421en
dc.subject.lccRCen
dc.titleOMNIgene.SPUTUM suppresses contaminants whilst maintaining Mycobacterium tuberculosis viability and obviates cold-chain transporten
dc.typeJournal articleen
dc.contributor.institutionUniversity of St Andrews. School of Medicineen
dc.contributor.institutionUniversity of St Andrews. Infection and Global Health Divisionen
dc.contributor.institutionUniversity of St Andrews. Global Health Implementation Groupen
dc.contributor.institutionUniversity of St Andrews. Gillespie Groupen
dc.contributor.institutionUniversity of St Andrews. Biomedical Sciences Research Complexen
dc.contributor.institutionUniversity of St Andrews. Infection Groupen
dc.identifier.doi10.1183/23120541.00074-2017
dc.description.statusPeer revieweden


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