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    • Estimating empirical codon hidden Markov models 

      De Maio, Nicola; Holmes, Ian; Schlötterer, Christian; Kosiol, Carolin (2013-03) - Journal article
      Empirical codon models (ECMs) estimated from a large number of globular protein families outperformed mechanistic codon models in their description of the general process of protein evolution. Among other factors, ECMs ...